Insertion junction: CLIP2.036439_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036439
Chromosome:chromosome 16
Location:4461551
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667900 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor; ANT-subfamily ortholog intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTAGGTTGCGGAGTGCAGGGTGCTGGGTGGTGCAGGGGTGCGGGGT
Internal bar code:AAACAACAAGCTATCGAATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1121
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCACCCGACATGTTCACG
Suggested primer 2:GGTAGGTGGTAGGTGGTTGC