Insertion junction: CLIP2.036448_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036448
Chromosome:chromosome 12
Location:1130684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490950 (1 of 4) IPR012337//IPR025398 - Ribonuclease H-like domain // Domain of unknown function DUF4371 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGAATGTGGATGTCTCGTGCTAATAATTTGGCATACGAACGTTTGAAT
Internal bar code:GCGTGAGTACTGTGTGGGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:846
LEAP-Seq percent confirming:5.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTCCTGACGAGTGAGCA
Suggested primer 2:GGCCGTTCTATGAGAGGCTC