Insertion junction: CLIP2.036460_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036460
Chromosome:chromosome 1
Location:8221926
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800147 (1 of 3) 3.2.1.8 - Endo-1,4-beta-xylanase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGAGGCAGGGAGGGAGGCTGTATTTGAGCATGTTGCTGCTGCTGTGGT
Internal bar code:GTTTTCTTAACAACGAGCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2439
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGGTGACTTCGGCCAAA
Suggested primer 2:GAGTTGCATACCCCTCTCCC