Insertion junction: CLIP2.036465_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036465
Chromosome:chromosome 17
Location:3482299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723950 FAP397 Flagellar Associated Protein 397 with UDP-galactose 4-epimerase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTTACGTGATACCCGCCATGTGCCGCCGCTACGGTGGTCTGCATGCA
Internal bar code:TTATAGATCTGCATCGGCCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:6663
LEAP-Seq percent confirming:97.2603
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCACCCACGATGAACACA
Suggested primer 2:GTTCAAGGTGCGTTGGGAAC