Insertion junction: CLIP2.036479_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036479
Chromosome:chromosome 2
Location:7129193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390208 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGGCCGGCCCGAGTCCTCCAGCAATTTGCGGATGTTGAGCTGCGAG
Internal bar code:AAGACTGGGGGTTTAAGGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:455
LEAP-Seq percent confirming:53.5714
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCAGGCCGAGGGAATTG
Suggested primer 2:AGGTGCCTCCGTCAAAGATG