Insertion junction: CLIP2.036481_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036481
Chromosome:chromosome 10
Location:247146
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419400 (1 of 139) IPR011011 - Zinc finger, FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAACTAGACCATCTTTTAGACGCACCTCCGGTTCATTGCATCGCTTCC
Internal bar code:ATGGTCACGGTGTACAGAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2601
LEAP-Seq percent confirming:82.6087
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCCTCTGTCAGCGTATC
Suggested primer 2:CCAAACAGTTGTCACGCAGG