Insertion junction: CLIP2.036486_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036486
Chromosome:chromosome 10
Location:899512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423950 (1 of 1) PTHR12952//PTHR12952:SF0 - SYS1 // PROTEIN SYS1 HOMOLOG-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTAGGAATACGGCGCTCAAGCAGGCAGTCAGCAGGAGCGATAGCACGC
Internal bar code:CGGTAAACCATCCCCCAGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2631
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTGCTACTCGCTTGTTC
Suggested primer 2:TATGGTGAGGAGAGCGGGAA