Insertion junction: CLIP2.036498_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036498
Chromosome:chromosome 13
Location:4000990
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590400 (1 of 1) PF00041//PF04969 - Fibronectin type III domain (fn3) // CS domain (CS) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCCACCCAATCCTCTCTTCCTCGCTACTTTTGCACTTGGTTTGGTTT
Internal bar code:CTAGGGATGGATTTCGTGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1013
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCAGCTTCAAGGTAGGT
Suggested primer 2:ACCCTCAGCCAATCAAGAGC