Insertion junction: CLIP2.036504_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036504
Chromosome:chromosome 9
Location:3363662
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395584 (1 of 139) IPR011011 - Zinc finger, FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAGAGCCTCCGCCGCCGCAGCATCAGCCGCACCAGCACCAGCTGCCA
Internal bar code:TAGAACTAACATTTAGGGCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1821
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGCATCGACCTCCACAG
Suggested primer 2:GGCCTCGCAGCATGTAGTTA