Insertion junction: CLIP2.036504_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036504
Chromosome:chromosome 9
Location:3363666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395584 (1 of 139) IPR011011 - Zinc finger, FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACGGTTGCAATTGCGGCTGCGGAGGCGGTGCTTGCGGCTGGTGTGCGT
Internal bar code:TAGAACTAACATTTAGGGCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:563
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTCGCAGCATGTAGTTA
Suggested primer 2:CTCTGCATCGACCTCCACAG