Insertion junction: CLIP2.036511_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036511
Chromosome:chromosome 9
Location:5280997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407200 POD1 Putative all-trans-retinol 13%252C14-reductase; (1 of 3) 5.2.1.13 - Prolycopene isomerase / CRTISO intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGCCGTACGCGAGAGACCTAAACAGCGGTTCTGTGGAAGGGCGGCAT
Internal bar code:ACCGGAACTACCGGTAGGCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1447
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCGCAGACACACAAAAA
Suggested primer 2:GGTAAGGGAGAGAGGGACGT