Insertion junction: CLIP2.036513_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036513
Chromosome:chromosome 3
Location:3336308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166000 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCCTGTTCGGCCACGCGCGCGGCCTGGGCAGCGGCAATGCGCATTC
Internal bar code:TAGCTAGGCTGAGTCTTTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1727
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACAGGTCGTTCAGCTTC
Suggested primer 2:CCATAGCGCATTTCCACACG