Insertion junction: CLIP2.036523_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036523
Chromosome:chromosome 5
Location:1529727
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234662 (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGACACACCGAGCAGTGAACCGTTGAGACGTCAAGCACAAATCTATT
Internal bar code:GCGAACGTGTATTATCGTAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1389
LEAP-Seq percent confirming:23.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTCGCTTGCGGTAATGC
Suggested primer 2:CCTATGCCACGTCTCGAGTC