Insertion junction: CLIP2.036537_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036537
Chromosome:chromosome 17
Location:1721573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708400 SUB12 (1 of 1) 3.4.21.66 - Thermitase / Thermophilic Streptomyces serine protease; Subtilisin-like protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAACCCGTGCGCCCTTCATCGCCCTGACGTTTCTCGCGCTCATCCCA
Internal bar code:TCTTGCCATTGCTCTGCTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1014
LEAP-Seq percent confirming:59.5238
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACGGGGAAAACAGGTTC
Suggested primer 2:TGCTGTTGCATCCTGTTTGC