Insertion junction: CLIP2.036538_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036538
Chromosome:chromosome 8
Location:3857618
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381702 ALDH5,ALDH5G1 (1 of 1) 1.2.1.16 - Succinate-semialdehyde dehydrogenase (NAD(P)(+)); Aldehyde dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGAATGTAACCCTCCCCCAACAACCCTTGCACCCACAGGCATCGTTG
Internal bar code:CAGCGCTCACTGCTAAAGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:663
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGCCGGTCTCTACAAAC
Suggested primer 2:TGGCACAGAGAAGTGTAGCG