Insertion junction: CLIP2.036541_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036541
Chromosome:chromosome 12
Location:5032904
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g525400 PTK15 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED; Protein tyrosine kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCATCTTACTTACCGATTCACGCACACGGTCGCCGGCCGCAGCCCCG
Internal bar code:TCACTCAGCGGATTATAACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3568
LEAP-Seq percent confirming:95.3125
LEAP-Seq n confirming:122
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:128

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGAGTAACGACCAAGGC
Suggested primer 2:AATCATCTGCAGTGGCCGAA