Insertion junction: CLIP2.036547_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036547
Chromosome:chromosome 3
Location:4527533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800334 (1 of 34) IPR003072 - Orphan nuclear receptor, NOR1 type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCCGCCGTCGCCGATGCCGCCTAGTCCGCATCTGTCTTCGCCACTGC
Internal bar code:AAACAGTACCGCCTAACTAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:991
LEAP-Seq percent confirming:2.17391
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAAGACAGATGCGGACTA
Suggested primer 2:TAGTCCGCATCTGTCTTCGC