Insertion junction: CLIP2.036553_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036553
Chromosome:chromosome 12
Location:2009113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801373 (1 of 2) IPR000104//IPR000477//IPR005135 - Antifreeze protein, type I // Reverse transcriptase domain // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGAAGGGTTGGGACGCTGTGCCGTTTGCGCATCCCTTCATATCTCGG
Internal bar code:GTCAGTCCGGACTATATGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5148
LEAP-Seq percent confirming:79.661
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGCCGACTTTATTTCCG
Suggested primer 2:GTGGTCGCTGAAATGGGAGA