Insertion junction: CLIP2.036554_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036554
Chromosome:chromosome 12
Location:5844939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533300 SRE2 Pre-mRNA splicing factor, SR-related; (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTAGTCCAGCACGTGCCGCGTCACGCGCTGGCCCGAGCTCACGGGACT
Internal bar code:ATCTTCAAGTATAGTAATTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1686
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGGAGGTGTTTGGATGG
Suggested primer 2:GATCGTCATGTGGCGGATCT