Insertion junction: CLIP2.036560_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036560
Chromosome:chromosome 3
Location:6431031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193000 HAD5 Halo-acid dehalogenase-like hydrolase; (1 of 1) 3.1.3.29 - N-acylneuraminate-9-phosphatase intron
Cre03.g193050 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAGATTAGAGTGCTTTGTTTTCTGAAGCAGAGGCTCCAGCGCCCGTG
Internal bar code:TGCTGTAAGGAGTAAGGCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2947
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCTGCACACAAGTTGCA
Suggested primer 2:CCATGCATGATCACAGCAGC