Insertion junction: CLIP2.036563_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036563
Chromosome:chromosome 6
Location:2036770
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800622 (1 of 8) PF06011 - Transient receptor potential (TRP) ion channel (TRP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGCCCATGCGCGCTACCGCGCCCGCCACGTCCCACGCCCCGATGCTGT
Internal bar code:AATGTCACAAGAGTATAAAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3514
LEAP-Seq percent confirming:87.0588
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATCCTCCTCTCCACTCA
Suggested primer 2:CCCGAGTTTGTGTAGGCTGT