Insertion junction: CLIP2.036564_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036564
Chromosome:chromosome 15
Location:652199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g637000 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGTGAAACCGCAAACCGCATATGCAGTTCTCCTTGCAGCGCGACTGT
Internal bar code:CCTTTGGGGTCGATTGAGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:243
LEAP-Seq percent confirming:43.4783
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAAACACCGAAGCACTC
Suggested primer 2:CGACTGCATACCCAGGGTTT