Insertion junction: CLIP2.036566_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036566
Chromosome:chromosome 12
Location:2213103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508900 MAPK6 (1 of 3) K04371 - mitogen-activated protein kinase 1/3 (MAPK1_3); Mitogen-Activated Protein Kinase 6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACTGCTAGCGCCAGACAGCACTTTTGTACATTAGAGGCATGTTTGTT
Internal bar code:TTTTTACCGGTAGAAGTAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1435
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTGAGGTTTCTCCCCAG
Suggested primer 2:ACAACGTCCATGCGTACCTT