Insertion junction: CLIP2.036571_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036571
Chromosome:chromosome 10
Location:5633117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458800 SRR31 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCTTAGCAGTGTGCGGTGGGCCTCGCCGCACGTGCCCATCCAGGCACA
Internal bar code:AAACAACTTAACTTTCGGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3792
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTGTGAGGGCAGTAGGG
Suggested primer 2:ATTGCTGTGGAGCTGTCGAA