Insertion junction: CLIP2.036572_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036572
Chromosome:chromosome 3
Location:4941820
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179100 UFD1b UFD1b homolog; (1 of 1) PF00789//PF03152 - UBX domain (UBX) // Ubiquitin fusion degradation protein UFD1 (UFD1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCAGCAGCCTCCGGCTCAGGGGGCAGTGATGCCGCCAGCCGCGCTTG
Internal bar code:GGTCTTTTCAACCAATCACACA

Confirmation - LEAP-Seq

LEAP-Seq distance:900
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCATGCATACGGTATGG
Suggested primer 2:GCGGGGTTTGACAGTTTGAC