Insertion junction: CLIP2.036575_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036575
Chromosome:chromosome 8
Location:1990555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g368550 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGCAATCAGCGAGGTCATGTAAGTTTTGGCTTTTGGCTTGTTGCTG
Internal bar code:TGCTAGTACAGCCCGGTCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1585
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GACGAATACGGTACCGGTCC
Suggested primer 2:TAGAACTTACGGGCTCGGGA