Insertion junction: CLIP2.036575_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036575
Chromosome:chromosome 8
Location:1990556
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g368550 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCTGCAGGCAGGGCACACAGCAGCGCAGCAGCGCACGGGCGCGTAT
Internal bar code:TGCTAGTACAGCCCGGTCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3620
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TAGAACTTACGGGCTCGGGA
Suggested primer 2:GACGAATACGGTACCGGTCC