Insertion junction: CLIP2.036577_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036577
Chromosome:chromosome 4
Location:1904532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218450 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGGCAGGACTAGTTAGGGAAGGGGTGTAACGTGCGAGACGAAGAATG
Internal bar code:TTATCCATCAAGCGTATATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:463
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTACAAGGAGCTGCTGCACT
Suggested primer 2:ACAACCTTGCGTCACTCACA