Insertion junction: CLIP2.036585_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036585
Chromosome:chromosome 1
Location:1477836
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007901 (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAGTAGTATGCTTGTCACCACGGCTTGTGGCTGAGAAGTACGACACA
Internal bar code:GTTGCTGTGAGCTACTTCATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1350
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACCCACCACATTACTCC
Suggested primer 2:GCATCAGCAGCAGCAACATT