Insertion junction: CLIP2.036592_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036592
Chromosome:chromosome 4
Location:3012153
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225000 (1 of 34) IPR003072 - Orphan nuclear receptor, NOR1 type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCAAGACCAATCAAATAGGGAGTGCTCAGCACGTGTGGGGCTGGGGC
Internal bar code:GTTTACAGTGTTAAAATAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1762
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGGAATTGGGGTGGTGG
Suggested primer 2:TAACACACGGCTTTCTCCCC