Insertion junction: CLIP2.036592_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036592
Chromosome:chromosome 4
Location:3012155
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225000 (1 of 34) IPR003072 - Orphan nuclear receptor, NOR1 type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATATAACCCCCACCCCAGCCCCGTTGCTGTTCCCCCAAGAGCGCCTACC
Internal bar code:CACTCAAATGCTGCTCAATGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:82
LEAP-Seq percent confirming:31.5789
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TAACACACGGCTTTCTCCCC
Suggested primer 2:GAGAGGAATTGGGGTGGTGG