Insertion junction: CLIP2.036594_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036594
Chromosome:chromosome 17
Location:5062177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g736300 (1 of 1) IPR000104//IPR011047//IPR018391 - Antifreeze protein, type I // Quinonprotein alcohol dehydrogenase-like superfamily // Pyrrolo-quinoline quinone beta-propeller repeat CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGGCGCCGCCGCCGCCGGCCAGCAGCGATGAGCCGCCGCCAGGCAGTG
Internal bar code:CTGGCACTATCTAGCTTTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:944
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGCGGATTTGCTGTTT
Suggested primer 2:CTTGACCACAAACTCAGCGC