Insertion junction: CLIP2.036595_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036595
Chromosome:chromosome 17
Location:3929172
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802075 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGCATCGCGGATGGCGCCCGCACCCAACAACGCCATCAATCGGACCC
Internal bar code:CAGTGGTAAGGCGGATGAACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3242
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCGTCTGACTGGCAGTG
Suggested primer 2:TAGGACGTTTCGCTGGCTTT