Insertion junction: CLIP2.036597_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036597
Chromosome:chromosome 3
Location:8223925
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200200 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGACATGCAGCTATGCAACATTCATCGCCCGCAAGGGACGCAAGCTCTG
Internal bar code:GGTGGGAGCACTTGGTGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2897
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTATGCGGCTCTAAGCG
Suggested primer 2:CTGAATGGGCGGCATTTACG