Insertion junction: CLIP2.036599_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036599
Chromosome:chromosome 3
Location:4816491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178100 MOT51 (1 of 1) PTHR10877//PTHR10877:SF116 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED; Predicted protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCTGAAGAAGTACCGCAACTGTTGGAACCTCACCAAGATCAAGATCG
Internal bar code:GCAAAACATAGGACGAATTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1547
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGAAGGTGAAGTTGTCCA
Suggested primer 2:AAATCGCTGTGTTGTTGGGC