Insertion junction: CLIP2.036600_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036600
Chromosome:chromosome 7
Location:4436838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343300 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGCACCGTTCGGCCGCGGTACCTGTGGCTGCTGTCTCAAGGCCAGGT
Internal bar code:AAGAGGGTGTTTTGAATGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2330
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGCTCGCAATCCAAGTG
Suggested primer 2:ACCTGCTGATGGATGTGCTC