Insertion junction: CLIP2.036604_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036604
Chromosome:chromosome 17
Location:858640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702250 TRP4 Transient receptor potential ion channel protein; (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCAAGGAACAGGAGCAGCAATTGTGCGTGCTCCTGAGTCCCGGTTAA
Internal bar code:CGCAACGCAGTATGTGTATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:772
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTGTTGGATGAGGAGGC
Suggested primer 2:AGCACAGCACATACCTCCAC