Insertion junction: CLIP2.036607_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036607
Chromosome:chromosome 16
Location:2872620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663000 THB12,PRX (1 of 6) PTHR10681//PTHR10681:SF118 - THIOREDOXIN PEROXIDASE // SUBFAMILY NOT NAMED; Truncated hemoglobin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACTCGCAGTGACACTCGCACACCCACGCCTTCGCCCTTGCATGCGCAC
Internal bar code:GGAGCGTTTGGACGGGTTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:866
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACTGTCAGCAACTCCGT
Suggested primer 2:TTGAGGGAGGCTTGATGCAG