Insertion junction: CLIP2.036622_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036622
Chromosome:chromosome 10
Location:381065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420500 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL intron
Cre10.g420512 (1 of 13) 3.1.13.4 - Poly(A)-specific ribonuclease 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACTGTTTGTCCAGGGTGGAGTGCTGCGGGGCGCTGCCTGCATGCTGCT
Internal bar code:GGGAACAGTAATTAGTCTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:201
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTTCTCCAGGTGCTTGGC
Suggested primer 2:CATCACCCTGACCTTTCCCC