Insertion junction: CLIP2.036622_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036622
Chromosome:chromosome 10
Location:381073
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420500 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL intron
Cre10.g420512 (1 of 13) 3.1.13.4 - Poly(A)-specific ribonuclease 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCTGCCGCCATCCCGTCCGCCTCCCTGACTGCAGTCCTGCAGTACTG
Internal bar code:GGGAACAGTAATTAGTCTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:524
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CATCACCCTGACCTTTCCCC
Suggested primer 2:ATCTTCTCCAGGTGCTTGGC