Insertion junction: CLIP2.036632_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036632
Chromosome:chromosome 12
Location:2611123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506250 HTA18 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCCCAAGAAGACCAAGGGCGGCAAGGGCAGCGAGGAGGCCGCCTAAA
Internal bar code:GAACGCAGTCATTAGGACGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4436
LEAP-Seq percent confirming:99.2248
LEAP-Seq n confirming:128
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:129

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCATCCATGTCTATCGGC
Suggested primer 2:GAGCGGTTGTTTGACCCAAC