Insertion junction: CLIP2.036632_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036632
Chromosome:chromosome 17
Location:2415284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714500 HTA33,NCG10,HTA1 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAGCACACCGCCCGAGGCGATGGTCACCTCGCCCAGCAGCTTGCCCA
Internal bar code:TGAAAGGCGCGTATAGGTAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1239
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGGTTGTTTGACCCAAC
Suggested primer 2:CATGGTGCTCAGGATTGGGT