Insertion junction: CLIP2.036635_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036635
Chromosome:chromosome 2
Location:4250727
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104550 Paf1 complex subunit CDC73; (1 of 1) K15175 - parafibromin (CDC73) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTACCAGGTGACGGACAAGCCGCCCGCCAAGGACAGTCCGGACTGGG
Internal bar code:AGAATACCTGGGAAGGATCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:495
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTCTCGTCGCTGAAGTG
Suggested primer 2:GACGTCGCTCATCAACATGC