Insertion junction: CLIP2.036642_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036642
Chromosome:chromosome 16
Location:2079499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657350 SNRK2I (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGGCAGAAGGGTGGCTGGATGTCCCGGCTAGCTGCGGGCAGTTGGCC
Internal bar code:ATCGGATTGGCAATGAGGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1268
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCCCCTGCAAACATACT
Suggested primer 2:ATGTTCGACGTCAAGCAGGT