Insertion junction: CLIP2.036643_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036643
Chromosome:chromosome 8
Location:4399474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g385100 EFH5 EF-hand Calcium binding protein; (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGCGTCGTCCTCAGGTCCTCCTCGTCACTCATTCGCTGCCCGGGCCT
Internal bar code:ACCTATGCTAAAATCGCAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2868
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGCCTCATCGGTCTCAG
Suggested primer 2:ACATCCGTAAACCGTCGCTT