Insertion junction: CLIP2.036644_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036644
Chromosome:chromosome 1
Location:5112727
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035700 (1 of 781) IPR000104 - Antifreeze protein, type I intron
Cre01.g800093 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
Internal bar code:GCGCCGCACAAGGGGGTTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4442
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGGTCTGCAAGTTAGCC
Suggested primer 2:GTGAAGCTGTTCTCGGGGAA