Insertion junction: CLIP2.036645_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036645
Chromosome:chromosome 14
Location:428619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610647 (1 of 3) PF02209 - Villin headpiece domain (VHP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTGCCTGCGTCATCCGCGGCCTCTTCTCCTTGCAACCTCGTTCATGT
Internal bar code:CTAGTTGACTTAGCTGCCTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:416
LEAP-Seq percent confirming:50.9434
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCAACTCGCATATCCTCT
Suggested primer 2:GCCACAAACTCCTGGTACGA