Insertion junction: CLIP2.036648_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036648
Chromosome:chromosome 1
Location:5497475
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039000 CDS
Cre01.g039050 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGTGGCAGTGCCGGGGCCAGCAGTGCGCCCATTCTGCGGCCGCAGCT
Internal bar code:TGCAATTATTAAGATGGTTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1770
LEAP-Seq percent confirming:23.6842
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGGTCACAACCTCCAGA
Suggested primer 2:CAGAGCCTACACCCGTCATC