Insertion junction: CLIP2.036673_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036673
Chromosome:chromosome 7
Location:992503
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319452 PHC73 Putative pherophorin-chlamydomonas homolog; (1 of 2) IPR003072//IPR003882 - Orphan nuclear receptor, NOR1 type // Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATTTGGGTGCCTGTCGTCGTCGGCGCCAAGAGCCGAAGGGCCGTGGG
Internal bar code:CGCGTAAAGTTAAAGATGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1611
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGCTAGTCATTGCGGCA
Suggested primer 2:GTCCTGGTGGTGAGAGGTTG