Insertion junction: CLIP2.036681_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036681
Chromosome:chromosome 12
Location:9300898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542350 Universal Stress-Domain Containing Protein; (1 of 2) PTHR31964:SF26 - SUGAR UTILIZATION REGULATORY PROTEIN IMP2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCGTTACATGCGCTCACAGGGCTACGCAGTGCGCGGAATGGCAGGTG
Internal bar code:GCTTTGAAGGGATGGAGAGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:841
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTTTCTCCGACACAGAA
Suggested primer 2:CGAGCCAACGAAGAACTCCT